CDS

Accession Number TCMCG002C11287
gbkey CDS
Protein Id XP_020093140.1
Location join(28194..28253,29193..29282,29373..29456,29851..30015,31936..32123,33727..33799,34748..34801,35021..35278,35790..35996,36140..36243,37192..37333,37419..37553,37697..37873)
Gene LOC109713455
GeneID 109713455
Organism Ananas comosus

Protein

Length 578aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020237551.1
Definition DNA-binding protein SMUBP-2 isoform X5 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
KEGG_ko ko:K19036        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0000122        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0000977        [VIEW IN EMBL-EBI]
GO:0000981        [VIEW IN EMBL-EBI]
GO:0000982        [VIEW IN EMBL-EBI]
GO:0001012        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001078        [VIEW IN EMBL-EBI]
GO:0001227        [VIEW IN EMBL-EBI]
GO:0003008        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0007417        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008134        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0021510        [VIEW IN EMBL-EBI]
GO:0021515        [VIEW IN EMBL-EBI]
GO:0021517        [VIEW IN EMBL-EBI]
GO:0021522        [VIEW IN EMBL-EBI]
GO:0021953        [VIEW IN EMBL-EBI]
GO:0022008        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030182        [VIEW IN EMBL-EBI]
GO:0030424        [VIEW IN EMBL-EBI]
GO:0030426        [VIEW IN EMBL-EBI]
GO:0030427        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0032574        [VIEW IN EMBL-EBI]
GO:0032575        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033267        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036477        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043005        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043022        [VIEW IN EMBL-EBI]
GO:0043025        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043139        [VIEW IN EMBL-EBI]
GO:0043141        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043621        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044297        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044463        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048699        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050877        [VIEW IN EMBL-EBI]
GO:0050905        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0051260        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0097458        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0120038        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:0150034        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:1990955        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAAAACCCTTCTTGAGTTTCAGCCTAATAAGGGTGACGTTCTTCCCGCTCACAAGTTTGGACCACATGATGTGGTTGTTTTAAAGCAAAATAAGGCTGATTCAGGATGTACACCACTGGGGCAAGGCGTAGTTTATCGCTTGAAGGATTCTTCCATTACTGTTGCTTTTGATGATATTCCCGAGGATGGCTTAAACAGTCCTCTGCGCCTTGAGAAGGTTGCGAACGAGGTAACTTATCGCAGGATGAAGGATGCACTAAATCAACTTAGTTTGACTGTGCAAAAAGGACCTGCTGCTGATTTGATTCCCGTTTTATTTGGTGAGAAGCAACCTATACGTTCTAAGTCAGTTATGCAATTCGCTCCGTTTAACAAGAATCTTGATAATTCTCAGAAAGATGCCATCTCAAAGGCTCTCTCATCAAGGAACGTGTTTTTGCTTCATGGTCCTCCTGGGACTGGAAAAACAACAACAATTGTGGAAATAATCTTGCAAGAAGTCAAACGAGGAACAAAAATTCTTGCATGTGCTGCTTCGAATATTGCAGTTGATAATATTGTTGAACGACTATTTCCATATAGAGTAAAGTTGGTGAGGTTGGGGCACCCTGCACGCTTATTACCTCAGGTCTTAGAGAGTGCGCTCGATGCACAGGTTCTACGAGGTGATAACAGTAGCTTGGCAGGTGATATCCGCAAGGAAATGAAAGTTTTAAATGGGAAGCTGCTGAAAGTGAAAGATAGGAACACAAAAAGGGAAATAAGGAAAGAGCTTAGGACCCTTGCTAGAGAAGAGAGGAAGAGGCAGCAGCTGGCAGTTTCTGATGTTGTCAAAAATGCAGATGTTGTATTAACAACTTTGACTGGTGCATTTTCTCGGAAATTAGAAAATACTACATTTGATCTGGTCATTATTGATGAAGCTGCTCAGGCACTTGAGGTGGCATGCTGGATAGCTCTTTTGAAGGGATCAAGGTGTATGCTTGCTGGAGACCATATGCAACTTGCGCCTACAGTACAAAGTGTTCAAGCTGAGAGGAAGGGATTAGGAAAGACCCTGTTTGAACGTCTTGTGGGACTTTATGGTGAAGAGATCATGTCCATGCTTACTGTCCAATATCGAATGCATGATCTCATTATGAGGTGGTCATCAAAAGAACTCTACAATGATAAGATAATAGCACACCCAAGTGTTTCTGGACATAAGCTTTATGATCTTGAGGATGTGAAAAGGTCTTCTTCCACAGAGCCCACTCTTCTTCTCATCGACACAACAGGGTGTGACATGGAAGAAAAAAAAGATGAAGATAGCACCATGAATGAGGGTGAGGCTGCAGTATCTACTGCTCATGCGAAGCAACTTGTTGAAAGTGGTGTTTCTGCAACAGACATCGGAATCATCACTCCTTATGCTGCACAGGTACTTTGCCTTAAAATACTGAGAAGCAACGAAGACAAACTAAAAGATGTGGAGATTTCTACCGTAGATGGGTTTCAGGGTCGGGAGAAAGAGGCCATTATCATTTCGATGGTCAGATCTAACTCGAAGAGAGAGGTTGGTTTTCTGAGTGACCATAGGCGAATGAATGTTGCTGTGACACGTGCTAGGAGACAGTGCTGTCTTGTGTGTGACGTTGAGACTGTCAGTCAGGACAGTTTCTTAAAACGTTTGGTCGACTACTTCACGGAGCGTGGTGAATATTTAAGCGCATCTGAGTATGCACATGAATAA
Protein:  
MGKTLLEFQPNKGDVLPAHKFGPHDVVVLKQNKADSGCTPLGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALNQLSLTVQKGPAADLIPVLFGEKQPIRSKSVMQFAPFNKNLDNSQKDAISKALSSRNVFLLHGPPGTGKTTTIVEIILQEVKRGTKILACAASNIAVDNIVERLFPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNSSLAGDIRKEMKVLNGKLLKVKDRNTKREIRKELRTLAREERKRQQLAVSDVVKNADVVLTTLTGAFSRKLENTTFDLVIIDEAAQALEVACWIALLKGSRCMLAGDHMQLAPTVQSVQAERKGLGKTLFERLVGLYGEEIMSMLTVQYRMHDLIMRWSSKELYNDKIIAHPSVSGHKLYDLEDVKRSSSTEPTLLLIDTTGCDMEEKKDEDSTMNEGEAAVSTAHAKQLVESGVSATDIGIITPYAAQVLCLKILRSNEDKLKDVEISTVDGFQGREKEAIIISMVRSNSKREVGFLSDHRRMNVAVTRARRQCCLVCDVETVSQDSFLKRLVDYFTERGEYLSASEYAHE